MA_10436689g0010 (PAT2)

Aliases : PAT2

Description : large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex

Gene families : OG0006164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006164_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10436689g0010
Cluster	HCCA: Cluster_204

Target	Alias	Description	ECC score	Gene Family Method
Ceric.28G061600.1	PAT2, Ceric.28G061600	large subunit beta of AP-3 Golgi to vacuole cargo...	0.03	OrthoFinder output from all 47 species
Dcu_g19428	PAT2	large subunit beta of AP-3 Golgi to vacuole cargo...	0.05	OrthoFinder output from all 47 species
GSVIVT01016531001	PAT2	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.06	OrthoFinder output from all 47 species
Gb_19472	PAT2	large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex	0.05	OrthoFinder output from all 47 species
LOC_Os01g74180.1	PAT2, LOC_Os01g74180	large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex	0.05	OrthoFinder output from all 47 species
Ore_g20296	PAT2	large subunit beta of AP-3 Golgi to vacuole cargo...	0.03	OrthoFinder output from all 47 species
Solyc06g043030.4.1	PAT2, Solyc06g043030	large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species
Zm00001e029209_P001	PAT2, Zm00001e029209	large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	4	405

External Links

No external refs found!