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  5. MA_10436666g0010

MA_10436666g0010


Description : Histidine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|o82413|syhm_arath : 221.0)


Gene families : OG0005510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436666g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g076568 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04860 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0293.g063443 ATHRS1, HRS1 histidine-tRNA ligase & original description: CDS=102-1676 0.05 OrthoFinder output from all 47 species
Ceric.06G065200.1 ATHRS1, HRS1,... histidine-tRNA ligase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g01607 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025735001 ATHRS1, HRS1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
LOC_Os02g51830.1 ATHRS1, HRS1,... histidine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Solyc03g119280.3.1 ATHRS1, HRS1,... histidine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Zm00001e016663_P001 ATHRS1, HRS1,... histidine-tRNA ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR041715 HisRS-like_core 148 274
No external refs found!