MA_10436160g0020


Description : F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 312.0)


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436160g0020

Target Alias Description ECC score Gene Family Method Actions
Adi_g011761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g25311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.25 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g29053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09455 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 208 248
No external refs found!