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  5. MA_10435921g0010

MA_10435921g0010


Description : Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana (sp|q9lhs0|cap10_arath : 489.0)


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435921g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G32285 No alias ENTH/ANTH/VHS superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g015730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02242 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63284.t1 Aspi01Gene63284 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0276.g061428 No alias not classified & original description: CDS=1-2139 0.03 OrthoFinder output from all 47 species
Cba_g01197 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22099 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G031300.1 Ceric.06G031300 not classified & original description: pacid=50619961... 0.02 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Ehy_g06797 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011704001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
LOC_Os01g50010.1 LOC_Os01g50010 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
LOC_Os02g07900.1 LOC_Os02g07900 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os06g45050.1 LOC_Os06g45050 Putative clathrin assembly protein At5g57200... 0.02 OrthoFinder output from all 47 species
MA_10426143g0010 No alias Putative clathrin assembly protein At2g01600... 0.03 OrthoFinder output from all 47 species
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Nbi_g34710 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04709 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02261 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020948 No alias not classified & original description: CDS=2516-4330 0.02 OrthoFinder output from all 47 species
Sam_g49233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g008060.1.1 Solyc07g008060 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Spa_g27688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 147 276
IPR011417 ANTH_dom 34 143
No external refs found!