MA_10435131g0020 (SDE1, RDR6, SGS2)

Aliases : SDE1, RDR6, SGS2

Description : RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana (sp|q9sg02|rdr6_arath : 601.0)

Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10435131g0020
Cluster	HCCA: Cluster_175

Target	Alias	Description	ECC score	Gene Family Method
Gb_28426	ATRDRP1, RDR1	RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Pir_g09805	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g09066	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007855	RNA-dep_RNA_pol_euk-typ	409	622

External Links

No external refs found!