Coexpression cluster: Cluster_175 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)

ID	Label	% in cluster	Enrichment log2	p-value	Corrected p-value
GO:0097747	RNA polymerase activity	5.88% (3/51)	5.81	2.2e-05	0.001371
GO:0034062	5'-3' RNA polymerase activity	5.88% (3/51)	5.81	2.2e-05	0.001371
GO:0016779	nucleotidyltransferase activity	5.88% (3/51)	4.85	0.000161	0.006609
GO:0140640	catalytic activity, acting on a nucleic acid	5.88% (3/51)	3.51	0.002364	0.018177
GO:0097659	nucleic acid-templated transcription	3.92% (2/51)	4.83	0.002301	0.018866
GO:0006351	DNA-templated transcription	3.92% (2/51)	4.83	0.002301	0.018866
GO:0016070	RNA metabolic process	5.88% (3/51)	3.42	0.002816	0.020374
GO:0017004	cytochrome complex assembly	1.96% (1/51)	8.35	0.003058	0.020897
GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.96% (1/51)	8.77	0.002294	0.021709
GO:0008137	NADH dehydrogenase (ubiquinone) activity	1.96% (1/51)	8.77	0.002294	0.021709
GO:0050136	NADH dehydrogenase (quinone) activity	1.96% (1/51)	8.77	0.002294	0.021709
GO:0003955	NAD(P)H dehydrogenase (quinone) activity	1.96% (1/51)	8.77	0.002294	0.021709
GO:0003954	NADH dehydrogenase activity	1.96% (1/51)	8.77	0.002294	0.021709
GO:0033617	mitochondrial cytochrome c oxidase assembly	1.96% (1/51)	9.35	0.00153	0.023527
GO:0008535	respiratory chain complex IV assembly	1.96% (1/51)	9.35	0.00153	0.023527
GO:0033108	mitochondrial respiratory chain complex assembly	1.96% (1/51)	9.35	0.00153	0.023527
GO:0008250	oligosaccharyltransferase complex	1.96% (1/51)	8.03	0.003821	0.024738
GO:0140098	catalytic activity, acting on RNA	5.88% (3/51)	3.93	0.001042	0.025622
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	3.92% (2/51)	5.54	0.000861	0.026489
GO:0032774	RNA biosynthetic process	3.92% (2/51)	4.34	0.004456	0.027407
GO:0009059	macromolecule biosynthetic process	5.88% (3/51)	2.99	0.006408	0.037533
GO:0015453	oxidoreduction-driven active transmembrane transporter activity	1.96% (1/51)	6.77	0.009147	0.040181
GO:0005739	mitochondrion	1.96% (1/51)	6.77	0.009147	0.040181
GO:0044271	cellular nitrogen compound biosynthetic process	5.88% (3/51)	2.88	0.007894	0.040455
GO:0090304	nucleic acid metabolic process	5.88% (3/51)	2.9	0.007693	0.04114
GO:0016846	carbon-sulfur lyase activity	1.96% (1/51)	7.03	0.007628	0.042648
GO:0034654	nucleobase-containing compound biosynthetic process	3.92% (2/51)	3.8	0.009126	0.043174
GO:0034641	cellular nitrogen compound metabolic process	7.84% (4/51)	2.3	0.008775	0.043174
GO:0016651	oxidoreductase activity, acting on NAD(P)H	1.96% (1/51)	6.54	0.010663	0.04372
GO:0003968	RNA-dependent RNA polymerase activity	1.96% (1/51)	6.54	0.010663	0.04372

Enriched Clades (corrected p-value < 0.05) (download table)

Clade	% in cluster	Enrichment log2	p-value	Corrected p-value	Gene Family Method
No enriched Clades found

Similar Clusters (download table)

Species	Clustering Method	Target	Jaccard index	Gene Family Method (for comparison)	Actions
Abrodictyum obscurum	HCCA	Cluster_36	0.016	OrthoFinder output from all 47 species	Compare
Abrodictyum obscurum	HCCA	Cluster_176	0.024	OrthoFinder output from all 47 species	Compare
Actinostachys digitata	HCCA	Cluster_93	0.015	OrthoFinder output from all 47 species	Compare
Actinostachys digitata	HCCA	Cluster_302	0.015	OrthoFinder output from all 47 species	Compare
Actinostachys digitata	HCCA	Cluster_344	0.016	OrthoFinder output from all 47 species	Compare
Actinostachys digitata	HCCA	Cluster_348	0.025	OrthoFinder output from all 47 species	Compare
Actinostachys digitata	HCCA	Cluster_367	0.018	OrthoFinder output from all 47 species	Compare
Actinostachys digitata	HCCA	Cluster_386	0.016	OrthoFinder output from all 47 species	Compare
Angiopteris evecta	HCCA	Cluster_107	0.022	OrthoFinder output from all 47 species	Compare
Angiopteris evecta	HCCA	Cluster_111	0.017	OrthoFinder output from all 47 species	Compare
Angiopteris evecta	HCCA	Cluster_126	0.022	OrthoFinder output from all 47 species	Compare
Angiopteris evecta	HCCA	Cluster_151	0.022	OrthoFinder output from all 47 species	Compare
Azolla filiculoides	HCCA	Cluster_80	0.02	OrthoFinder output from all 47 species	Compare
Azolla filiculoides	HCCA	Cluster_94	0.019	OrthoFinder output from all 47 species	Compare
Azolla filiculoides	HCCA	Cluster_115	0.017	OrthoFinder output from all 47 species	Compare
Adiantum latifolium	HCCA	Cluster_47	0.017	OrthoFinder output from all 47 species	Compare
Adiantum latifolium	HCCA	Cluster_115	0.018	OrthoFinder output from all 47 species	Compare
Adiantum latifolium	HCCA	Cluster_141	0.016	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_28	0.016	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_43	0.022	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_51	0.019	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_88	0.016	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_133	0.016	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_136	0.016	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_219	0.017	OrthoFinder output from all 47 species	Compare
Alsophila latebrosa	HCCA	Cluster_246	0.02	OrthoFinder output from all 47 species	Compare
Amblovenatum opulentum	HCCA	Cluster_13	0.018	OrthoFinder output from all 47 species	Compare
Amblovenatum opulentum	HCCA	Cluster_90	0.016	OrthoFinder output from all 47 species	Compare
Amblovenatum opulentum	HCCA	Cluster_164	0.016	OrthoFinder output from all 47 species	Compare
Amblovenatum opulentum	HCCA	Cluster_213	0.016	OrthoFinder output from all 47 species	Compare
Alsophila spinulosa	HCCA	Cluster_68	0.015	OrthoFinder output from all 47 species	Compare
Alsophila spinulosa	HCCA	Cluster_94	0.016	OrthoFinder output from all 47 species	Compare
Alsophila spinulosa	HCCA	Cluster_121	0.019	OrthoFinder output from all 47 species	Compare
Alsophila spinulosa	HCCA	Cluster_143	0.017	OrthoFinder output from all 47 species	Compare
Alsophila spinulosa	HCCA	Cluster_149	0.031	OrthoFinder output from all 47 species	Compare
Amborella trichopoda	HCCA	Cluster_2	0.022	OrthoFinder output from all 47 species	Compare
Amborella trichopoda	HCCA	Cluster_80	0.029	OrthoFinder output from all 47 species	Compare
Amborella trichopoda	HCCA	Cluster_110	0.03	OrthoFinder output from all 47 species	Compare
Amborella trichopoda	HCCA	Cluster_117	0.022	OrthoFinder output from all 47 species	Compare
Amborella trichopoda	HCCA	Cluster_239	0.019	OrthoFinder output from all 47 species	Compare
Cibotium barometz	HCCA	Cluster_208	0.024	OrthoFinder output from all 47 species	Compare
Ceratopteris richardii	HCCA	Cluster_55	0.017	OrthoFinder output from all 47 species	Compare
Ceratopteris richardii	HCCA	Cluster_85	0.018	OrthoFinder output from all 47 species	Compare
Diplazium proliferum (Lam.) Kaulf.	HCCA	Cluster_148	0.02	OrthoFinder output from all 47 species	Compare
Dicranopteris curranii	HCCA	Cluster_22	0.022	OrthoFinder output from all 47 species	Compare
Dicranopteris curranii	HCCA	Cluster_41	0.023	OrthoFinder output from all 47 species	Compare
Dicranopteris curranii	HCCA	Cluster_87	0.021	OrthoFinder output from all 47 species	Compare
Davallia denticulata	HCCA	Cluster_44	0.016	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_1	0.02	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_4	0.016	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_5	0.016	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_21	0.023	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_23	0.018	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_30	0.021	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_38	0.015	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_55	0.016	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_65	0.022	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_97	0.029	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_99	0.023	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_101	0.019	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_132	0.02	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_142	0.033	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_163	0.02	OrthoFinder output from all 47 species	Compare
Ginkgo biloba	HCCA	Cluster_166	0.02	OrthoFinder output from all 47 species	Compare
Lindsaea ensifolia	HCCA	Cluster_35	0.015	OrthoFinder output from all 47 species	Compare
Lindsaea ensifolia	HCCA	Cluster_163	0.019	OrthoFinder output from all 47 species	Compare
Lygodium flexuosum	HCCA	Cluster_52	0.018	OrthoFinder output from all 47 species	Compare
Lygodium flexuosum	HCCA	Cluster_54	0.031	OrthoFinder output from all 47 species	Compare
Lygodium flexuosum	HCCA	Cluster_68	0.015	OrthoFinder output from all 47 species	Compare
Lygodium flexuosum	HCCA	Cluster_118	0.02	OrthoFinder output from all 47 species	Compare
Marchantia polymorpha	HCCA	Cluster_26	0.019	OrthoFinder output from all 47 species	Compare
Marchantia polymorpha	HCCA	Cluster_35	0.019	OrthoFinder output from all 47 species	Compare
Marchantia polymorpha	HCCA	Cluster_62	0.019	OrthoFinder output from all 47 species	Compare
Ophioglossum reticulatum	HCCA	Cluster_85	0.02	OrthoFinder output from all 47 species	Compare
Oryza sativa	HCCA	Cluster_14	0.018	OrthoFinder output from all 47 species	Compare
Oryza sativa	HCCA	Cluster_70	0.016	OrthoFinder output from all 47 species	Compare
Oryza sativa	HCCA	Cluster_162	0.023	OrthoFinder output from all 47 species	Compare
Oryza sativa	HCCA	Cluster_171	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_5	0.016	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_14	0.033	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_16	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_21	0.034	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_23	0.019	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_30	0.037	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_34	0.026	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_43	0.022	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_45	0.026	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_51	0.019	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_56	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_57	0.023	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_60	0.027	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_64	0.017	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_65	0.016	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_68	0.022	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_80	0.018	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_81	0.025	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_84	0.018	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_90	0.051	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_105	0.015	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_106	0.032	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_107	0.018	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_109	0.035	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_114	0.016	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_119	0.03	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_125	0.047	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_133	0.022	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_138	0.023	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_140	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_141	0.026	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_145	0.022	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_148	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_149	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_167	0.024	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_177	0.023	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_178	0.034	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_189	0.016	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_192	0.019	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_193	0.017	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_194	0.022	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_197	0.017	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_201	0.026	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_205	0.021	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_206	0.054	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_218	0.026	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_252	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_260	0.021	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_303	0.025	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_312	0.02	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_314	0.021	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_443	0.026	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_446	0.022	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_1017	0.017	OrthoFinder output from all 47 species	Compare
Picea abies	HCCA	Cluster_1099	0.019	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_32	0.021	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_57	0.018	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_72	0.018	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_76	0.017	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_91	0.025	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_105	0.025	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_140	0.016	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_168	0.022	OrthoFinder output from all 47 species	Compare
Pleocnemia irregularis	HCCA	Cluster_181	0.024	OrthoFinder output from all 47 species	Compare
Psilotum nudum	HCCA	Cluster_119	0.024	OrthoFinder output from all 47 species	Compare
Psilotum nudum	HCCA	Cluster_130	0.017	OrthoFinder output from all 47 species	Compare
Salvinia molesta	HCCA	Cluster_138	0.019	OrthoFinder output from all 47 species	Compare
Salvinia cucullata	HCCA	Cluster_50	0.016	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_6	0.019	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_57	0.037	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_63	0.023	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_67	0.02	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_72	0.021	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_77	0.018	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_79	0.019	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_107	0.019	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_124	0.028	OrthoFinder output from all 47 species	Compare
Solanum lycopersicum	HCCA	Cluster_148	0.015	OrthoFinder output from all 47 species	Compare
Selaginella moellendorffii	HCCA	Cluster_13	0.017	OrthoFinder output from all 47 species	Compare
Stenochlaena palustris	HCCA	Cluster_70	0.016	OrthoFinder output from all 47 species	Compare
Stenochlaena palustris	HCCA	Cluster_195	0.019	OrthoFinder output from all 47 species	Compare
Tectaria incisa	HCCA	Cluster_11	0.024	OrthoFinder output from all 47 species	Compare
Tectaria incisa	HCCA	Cluster_59	0.015	OrthoFinder output from all 47 species	Compare
Tectaria incisa	HCCA	Cluster_100	0.017	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_2	0.016	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_9	0.019	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_28	0.021	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_62	0.02	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_71	0.018	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_73	0.017	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_78	0.018	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_101	0.021	OrthoFinder output from all 47 species	Compare
Vitis vinifera	HCCA	Cluster_110	0.034	OrthoFinder output from all 47 species	Compare
Zea mays	HCCA	Cluster_21	0.019	OrthoFinder output from all 47 species	Compare
Zea mays	HCCA	Cluster_51	0.015	OrthoFinder output from all 47 species	Compare
Zea mays	HCCA	Cluster_148	0.019	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_4	0.031	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_25	0.016	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_36	0.018	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_46	0.016	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_54	0.016	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_55	0.018	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_56	0.019	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_78	0.022	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_91	0.02	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_104	0.024	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_115	0.018	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_122	0.036	OrthoFinder output from all 47 species	Compare
Arabidopsis thaliana	HCCA	Cluster_135	0.024	OrthoFinder output from all 47 species	Compare

Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms

Coexpression cluster: Cluster_175 (HCCA)

Average Expression Profile

Associations