MA_10434945g0010 (SAMDC)


Aliases : SAMDC

Description : S-adenosyl methionine decarboxylase


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434945g0010
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00139140 SAMDC4, BUD2,... Polyamine... 0.04 OrthoFinder output from all 47 species
Adi_g004507 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g37641 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04281 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10247 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g35112 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61164.t1 Aspi01Gene61164 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03355 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G057800.1 SAMDC, Ceric.02G057800 EC_4.1 carbon-carbon lyase & original description:... 0.03 OrthoFinder output from all 47 species
Gb_35976 No alias S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os09g37120.1 LOC_Os09g37120 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species
MA_10429775g0030 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Msp_g27068 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07578 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14253 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14868 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g089610.2.1 Solyc02g089610 S-adenosyl methionine decarboxylase 0.05 OrthoFinder output from all 47 species
Solyc05g010420.2.1 Solyc05g010420 S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc06g054460.1.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Spa_g11926 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00861 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA Interproscan
BP GO:0006597 spermine biosynthetic process IEA Interproscan
BP GO:0008295 spermidine biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004334 fumarylacetoacetase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP HCCA
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 113 439
IPR012511 AdoMetDC_leader 5 34
No external refs found!