1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10434101g0020

MA_10434101g0020


Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434101g0020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 ATERF3, ERF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AMTR_s00115p00032780 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Adi_g060280 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Adi_g082590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106006 ATERF12, ERF12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05002 HRE2 subgroup ERF-VII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g21812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31880 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g32672 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g03086 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g03305 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g07731 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g21513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g35811 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05551.t1 Aspi01Gene05551 subgroup ERF-I transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34453.t1 Aspi01Gene34453 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47230.t1 TINY2, Aspi01Gene47230 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47265.t1 TINY2, Aspi01Gene47265 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene49734.t1 HRE2, Aspi01Gene49734 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.24G042900.1 DEAR2, Ceric.24G042900 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Ceric.24G043300.1 Ceric.24G043300 not classified & original description: pacid=50629223... 0.01 OrthoFinder output from all 47 species
Dcu_g04596 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05445 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Dcu_g09294 No alias subgroup ERF-VI transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g16227 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dcu_g45986 DREB26 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14006 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16478 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01032983001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
LOC_Os02g06330.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g42510.1 RAP2.12, LOC_Os07g42510 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g23064 DEAR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g27115 ORA47 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g40614 ERF110 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_168025g0010 ERF110 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Msp_g10836 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Msp_g14138 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011388 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Solyc01g108240.3.1 RRTF1, Solyc01g108240 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc02g090770.1.1 ERF110, Solyc02g090770 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc03g093610.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc06g035700.1.1 Solyc06g035700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc08g007820.1.1 CBF4, DREB1D,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Solyc08g007830.1.1 DDF1, Solyc08g007830 Dehydration-responsive element-binding protein 1F... 0.01 OrthoFinder output from all 47 species
Solyc08g007840.3.1 Solyc08g007840 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc10g050960.3.1 RRTF1, Solyc10g050960 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc10g050970.1.1 RRTF1, Solyc10g050970 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Tin_g21202 No alias subgroup ERF-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 24 72
No external refs found!