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  5. MA_10431670g0010

MA_10431670g0010


Description : DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana (sp|f4kfv7|suv3l_arath : 765.0)


Gene families : OG0002203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431670g0010

Target Alias Description ECC score Gene Family Method Actions
Aev_g02551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011395001 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.06 OrthoFinder output from all 47 species
Gb_39537 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g53500.1 ATSUV3, EDA15,... ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza... 0.01 OrthoFinder output from all 47 species
LOC_Os04g38630.1 LOC_Os04g38630 ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.04 OrthoFinder output from all 47 species
Mp6g01600.1 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.03 OrthoFinder output from all 47 species
Msp_g08659 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g25242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g011460.2.1 Solyc11g011460 DExH-box ATP-dependent RNA helicase DExH18,... 0.03 OrthoFinder output from all 47 species
Spa_g12897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007912_P001 Zm00001e007912 ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 437 543
No external refs found!