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Aliases : VCS
Description : Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana (sp|q9ltt8|vcs_arath : 242.0)
Gene families : OG0001030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10431534g0020 | |
| Cluster | HCCA: Cluster_130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G13300 | VCS | Transducin/WD40 repeat-like superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g055830 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g071661 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107355 | VCR | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g04893 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g11471 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g13274 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g63425 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g03608 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07559 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07051 | VCS | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27245 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g74923 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G068900.1 | VCS, Ceric.06G068900 | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g553100 | VCR | Varicose-related protein OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14564 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32809 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05835 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g11716 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g10360 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014783001 | VCS | RNA processing.RNA decay.deadenylation-dependent... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_04906 | VCS | scaffold component VCS of mRNA decapping complex | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os02g49090.1 | VCS, LOC_Os02g49090 | scaffold component VCS of mRNA decapping complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g19660.1 | VCS, LOC_Os06g19660 | scaffold component VCS of mRNA decapping complex | 0.08 | OrthoFinder output from all 47 species | |
| Len_g08328 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g25353 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18274 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10431534g0030 | VCS | scaffold component VCS of mRNA decapping complex | 0.13 | OrthoFinder output from all 47 species | |
| Msp_g14526 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26178 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g01496 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09332 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g36602 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10110 | VCS | scaffold component *(VCS) of mRNA decaPping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53569 | VCS | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16345 | No alias | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g005920.4.1 | VCS, Solyc10g005920 | scaffold component VCS of mRNA decapping complex | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07074 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g17551 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g24736 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015689_P001 | VCS, Zm00001e015689 | scaffold component VCS of mRNA decapping complex | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e023399_P003 | VCS, Zm00001e023399 | scaffold component VCS of mRNA decapping complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |