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Aliases : VCR
Description : Varicose-related protein OS=Arabidopsis thaliana (sp|q9ltt9|vcr_arath : 145.0)
Gene families : OG0001030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10431534g0010 | |
| Cluster | HCCA: Cluster_130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G13300 | VCS | Transducin/WD40 repeat-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g055830 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04893 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11471 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13274 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g63425 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07559 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g14873 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G068900.1 | VCS, Ceric.06G068900 | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05835 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g11716 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014783001 | VCS | RNA processing.RNA decay.deadenylation-dependent... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_04906 | VCS | scaffold component VCS of mRNA decapping complex | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g19660.1 | VCS, LOC_Os06g19660 | scaffold component VCS of mRNA decapping complex | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g18274 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431534g0030 | VCS | scaffold component VCS of mRNA decapping complex | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g14526 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26178 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09332 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g25441 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23486 | VCS | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16345 | No alias | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g005920.4.1 | VCS, Solyc10g005920 | scaffold component VCS of mRNA decapping complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015689_P001 | VCS, Zm00001e015689 | scaffold component VCS of mRNA decapping complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |