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  5. MA_10431485g0010

MA_10431485g0010 (VCL1, EMB258, MAN)


Aliases : VCL1, EMB258, MAN

Description : component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes


Gene families : OG0004533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431485g0010
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Adi_g022790 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Aev_g06149 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.79 No alias Vesicle trafficking.target membrane... 0.01 OrthoFinder output from all 47 species
Cre03.g199311 VCL1, EMB258, MAN Vesicle trafficking.target membrane... 0.01 OrthoFinder output from all 47 species
Dcu_g04890 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Gb_09954 VCL1, EMB258, MAN component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.03 OrthoFinder output from all 47 species
Solyc07g056220.3.1 VCL1, EMB258,... component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR006926 Vps16_N 2 163
No external refs found!