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  5. MA_10430352g0010

MA_10430352g0010


Description : FRIGIDA-like protein 4b OS=Arabidopsis thaliana (sp|q940h8|frl4b_arath : 187.0)


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430352g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00134410 evm_27.TU.AmTr_v1... FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g014978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G013900.1 Ceric.37G013900 not classified & original description: pacid=50615693... 0.03 OrthoFinder output from all 47 species
Dcu_g04781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15209 FRL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09930 FRL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24860 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_33604 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_40916 No alias FRIGIDA-like protein 4a OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g00652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g06900.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g00670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04962 FRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009308_P001 Zm00001e009308 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e033632_P002 Zm00001e033632 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 90 306
No external refs found!