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MA_10429367g0010


Description : DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana (sp|f4ilr7|dexh1_arath : 432.0)


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429367g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00237040 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G58060 No alias RNA helicase family protein 0.03 OrthoFinder output from all 47 species
AT5G04895 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
Ala_g12900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70473.t1 Aspi01Gene70473 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0449.g070725 No alias not classified & original description: CDS=208-3285 0.02 OrthoFinder output from all 47 species
Ceric.23G070100.1 Ceric.23G070100 not classified & original description: pacid=50609964... 0.03 OrthoFinder output from all 47 species
Cre12.g492450 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g19268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05411 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53760.1 LOC_Os03g53760 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g35260.1 LOC_Os04g35260 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g41812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g09990.1 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g20169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_19726V3.1 Pp3c17_19726 RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g09359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024829 No alias not classified & original description: CDS=1-315 0.03 OrthoFinder output from all 47 species
Sam_g07185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g006970.4.1 Solyc01g006970 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g47720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004608_P001 Zm00001e004608 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 2 69
IPR011709 DEAD-box_helicase_OB_fold 147 227
No external refs found!