MA_10429054g0020

Description : subunit alpha of coat protein complex

Gene families : OG0001943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001943_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10429054g0020

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00220200	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.05	OrthoFinder output from all 47 species
AT1G62020	No alias	Coatomer, alpha subunit	0.06	OrthoFinder output from all 47 species
AT2G21390	No alias	Coatomer, alpha subunit	0.08	OrthoFinder output from all 47 species
Adi_g011888	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Adi_g019461	No alias	subunit alpha of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Adi_g055848	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g055850	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08580	No alias	subunit alpha of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Als_g16600	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Aob_g30526	No alias	subunit alpha of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
Aop_g37693	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0157.g053779	No alias	subunit alpha of coat protein complex & original...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000144.152	No alias	Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
Cre13.g565850	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
Dcu_g07776	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Dde_g09955	No alias	subunit alpha of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Ehy_g08572	No alias	subunit alpha of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01009813001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
Gb_09624	No alias	subunit alpha of coat protein complex	0.08	OrthoFinder output from all 47 species
Gb_15817	No alias	subunit alpha of coat protein complex	0.06	OrthoFinder output from all 47 species
LOC_Os03g50340.1	LOC_Os03g50340	subunit alpha of coat protein complex	0.04	OrthoFinder output from all 47 species
LOC_Os03g50350.1	LOC_Os03g50350	subunit alpha of coat protein complex	0.06	OrthoFinder output from all 47 species
LOC_Os09g04110.1	LOC_Os09g04110	subunit alpha of coat protein complex	0.04	OrthoFinder output from all 47 species
Len_g20642	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Lfl_g09317	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Mp3g00050.1	No alias	subunit alpha of coat protein complex	0.05	OrthoFinder output from all 47 species
Msp_g03578	No alias	subunit alpha of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Msp_g23185	No alias	subunit alpha of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
Ore_g15161	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Ore_g19289	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Pnu_g27821	No alias	subunit alpha of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
Ppi_g17747	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Smo85610	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
Solyc04g080980.2.1	Solyc04g080980	subunit alpha of coat protein complex	0.08	OrthoFinder output from all 47 species
Solyc07g032100.3.1	Solyc07g032100	subunit alpha of coat protein complex	0.07	OrthoFinder output from all 47 species
Spa_g25852	No alias	subunit alpha of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
Zm00001e005441_P001	Zm00001e005441	subunit alpha of coat protein complex	0.07	OrthoFinder output from all 47 species
Zm00001e012192_P001	Zm00001e012192	subunit alpha of coat protein complex	0.04	OrthoFinder output from all 47 species
Zm00001e016505_P002	Zm00001e016505	subunit alpha of coat protein complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	6	40
IPR001680	WD40_repeat	143	178
IPR001680	WD40_repeat	100	133
IPR006692	Coatomer_WD-assoc_reg	242	569

External Links

No external refs found!

MA_10429054g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation