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  5. MA_10428975g0010

MA_10428975g0010


Description : transcription factor (CAMTA)


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428975g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 CAMTA3, SR1,... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
AT3G16940 No alias calmodulin binding;transcription regulators 0.04 OrthoFinder output from all 47 species
Dde_g37564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09186 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08907 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17074 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07183 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 399 417
IPR000048 IQ_motif_EF-hand-BS 423 441
No external refs found!