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  5. MA_10428293g0010

MA_10428293g0010


Description : CORVET-specific component VPS8 of HOPS/CORVET membrane tethering complexes


Gene families : OG0004817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428293g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G00800 No alias transducin family protein / WD-40 repeat family protein 0.05 OrthoFinder output from all 47 species
Adi_g104722 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Aev_g14975 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Aob_g31629 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.02 OrthoFinder output from all 47 species
Aop_g27461 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Azfi_s0580.g078297 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.05 OrthoFinder output from all 47 species
Ceric.08G032600.1 Ceric.08G032600 CORVET-specific component *(VPS8) of HOPS/CORVET... 0.04 OrthoFinder output from all 47 species
Cre13.g606350 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g19649 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
LOC_Os02g03220.1 LOC_Os02g03220 CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
MA_954448g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g27241 No alias CORVET-specific component *(VPS8) of HOPS/CORVET... 0.03 OrthoFinder output from all 47 species
Solyc05g044610.3.1 Solyc05g044610 CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.05 OrthoFinder output from all 47 species
Zm00001e013515_P001 Zm00001e013515 CORVET-specific component VPS8 of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 379 442
No external refs found!