MA_10427481g0010 (PBG1)

Aliases : PBG1

Description : component beta type-7 of 26S proteasome

Gene families : OG0004102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004102_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10427481g0010
Cluster	HCCA: Cluster_256

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00041p00154550	PBG1,...	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
AT1G56450	PBG1	20S proteasome beta subunit G1	0.05	OrthoFinder output from all 47 species
Adi_g007501	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Aev_g44777	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Ala_g00951	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Aop_g04985	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Azfi_s0350.g066539	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.06	OrthoFinder output from all 47 species
Cba_g16284	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Ceric.08G036200.1	PBG1, Ceric.08G036200	beta-type-7 component *(PBG) of 26S proteasome &...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000808.43	PBG1	Protein degradation.26S proteasome.20S core...	0.07	OrthoFinder output from all 47 species
Cre06.g280850	PBG1	Protein degradation.26S proteasome.20S core...	0.11	OrthoFinder output from all 47 species
Dac_g00589	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Dcu_g02600	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Dde_g21621	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Ehy_g26230	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
GSVIVT01025150001	PBG1	Protein degradation.26S proteasome.20S core...	0.06	OrthoFinder output from all 47 species
Gb_09437	PBG1	component beta type-7 of 26S proteasome	0.07	OrthoFinder output from all 47 species
LOC_Os09g33986.1	PBG1, LOC_Os09g33986	component beta type-7 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Mp6g01810.1	PBG1	component beta type-7 of 26S proteasome	0.05	OrthoFinder output from all 47 species
Msp_g12823	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Nbi_g04663	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.06	OrthoFinder output from all 47 species
Pir_g00404	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Pp3c18_13650V3.1	PBG1, Pp3c18_13650	20S proteasome beta subunit G1	0.04	OrthoFinder output from all 47 species
Sam_g07444	No alias	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Sam_g42977	No alias	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Smo271646	PBG1	Protein degradation.26S proteasome.20S core...	0.04	OrthoFinder output from all 47 species
Solyc11g069150.3.1	PBG1, Solyc11g069150	component beta type-7 of 26S proteasome	0.07	OrthoFinder output from all 47 species
Spa_g08872	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.09	OrthoFinder output from all 47 species
Spa_g16372	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Spa_g29943	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Tin_g06402	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Zm00001e010160_P002	PBG1, Zm00001e010160	component beta type-7 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Zm00001e034696_P001	PBG1, Zm00001e034696	component beta type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0016272	prefoldin complex	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	32	196

External Links

No external refs found!

MA_10427481g0010 (PBG1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation