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  5. MA_10427293g0010

MA_10427293g0010 (RPN5B)


Aliases : RPN5B

Description : regulatory component RPN5 of 26S proteasome


Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427293g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00018620 RPN5B,... Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038574 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z048700.1 RPN5B, Ceric.1Z048700 regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.57 RPN5B Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Cre14.g632775 RPN5B Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
LOC_Os03g63430.1 RPN5B, LOC_Os03g63430 regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp6g06620.1 RPN5B regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Msp_g01635 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc04g051370.4.1 RPN5B, Solyc04g051370 regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Spa_g09767 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e011647_P002 RPN5B, Zm00001e011647 regulatory component RPN5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e016264_P001 RPN5B, Zm00001e016264 regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR040896 RPN5_C 134 166
IPR000717 PCI_dom 20 128
No external refs found!