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  5. MA_10426511g0010

MA_10426511g0010 (EMB251, RFC3, EMB161, EMB2775)


Aliases : EMB251, RFC3, EMB161, EMB2775

Description : Replication factor C subunit 3 OS=Arabidopsis thaliana (sp|q8vxx4|rfc3_arath : 202.0)


Gene families : OG0003475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426511g0010
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00097520 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.04 OrthoFinder output from all 47 species
AT5G27740 EMB251, RFC3,... ATPase family associated with various cellular activities (AAA) 0.03 OrthoFinder output from all 47 species
Ala_g08186 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s1584.g104475 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.48 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
Cre16.g679950 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.03 OrthoFinder output from all 47 species
Dac_g27095 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57870.1 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.04 OrthoFinder output from all 47 species
Sam_g50241 No alias component *(RFC3) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species
Solyc01g020440.3.1 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.03 OrthoFinder output from all 47 species
Zm00001e005947_P001 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!