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  5. MA_10425986g0010

MA_10425986g0010 (QRT3)


Aliases : QRT3

Description : polygalacturonase (QRT3)


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10425986g0010
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Aev_g16422 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67503 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010377 QRT3 polygalacturonase *(QRT3) & original description: CDS=62-1624 0.04 OrthoFinder output from all 47 species
Ceric.21G028400.1 QRT3, Ceric.21G028400 polygalacturonase *(QRT3) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g31759 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14675 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58007 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44003 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29972 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26325 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13496 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40884 No alias polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g068400.3.1 QRT3, Solyc02g068400 polygalacturonase (QRT3) 0.04 OrthoFinder output from all 47 species
Spa_g33866 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44469 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006958_P005 QRT3, Zm00001e006958 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!