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MA_10329277g0010 (CARB)


Aliases : CARB

Description : Carbamoyl-phosphate synthase large chain, chloroplastic OS=Arabidopsis thaliana (sp|q42601|carb_arath : 624.0)


Gene families : OG0004410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10329277g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00226690 CARB,... Nucleotide metabolism.pyrimidines.ribonucleotide... 0.04 OrthoFinder output from all 47 species
AT1G29900 CARB carbamoyl phosphate synthetase B 0.05 OrthoFinder output from all 47 species
Aob_g13802 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037310 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.3 CARB Nucleotide metabolism.pyrimidines.ribonucleotide... 0.01 OrthoFinder output from all 47 species
Dcu_g07166 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14421 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01025125001 CARB Nucleotide metabolism.pyrimidines.ribonucleotide... 0.02 OrthoFinder output from all 47 species
LOC_Os01g38970.1 CARB, LOC_Os01g38970 large subunit of carbamoyl phosphate synthetase... 0.02 OrthoFinder output from all 47 species
Pp3c2_19430V3.1 CARB, Pp3c2_19430 carbamoyl phosphate synthetase B 0.01 OrthoFinder output from all 47 species
Solyc06g075340.4.1 CARB, Solyc06g075340 large subunit of carbamoyl phosphate synthetase... 0.04 OrthoFinder output from all 47 species
Zm00001e027763_P001 CARB, Zm00001e027763 large subunit of carbamoyl phosphate synthetase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 266 395
IPR005480 CarbamoylP_synth_lsu_oligo 45 127
No external refs found!