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  5. MA_10185331g0010

MA_10185331g0010 (TOPII, ATTOPII)


Aliases : TOPII, ATTOPII

Description : DNA topoisomerase 2 OS=Pisum sativum (sp|o24308|top2_pea : 161.0)


Gene families : OG0002559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10185331g0010
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Aop_g14194 TOPII, ATTOPII DNA topoisomerase *(TOP2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0248.g060132 TOPII, ATTOPII DNA topoisomerase *(TOP2) & original description: CDS=3554-4336 0.03 OrthoFinder output from all 47 species
Ceric.22G001800.1 TOPII, ATTOPII,... DNA topoisomerase *(TOP2) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.22G002000.1 TOPII, ATTOPII,... DNA topoisomerase *(TOP2) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.55 TOPII, ATTOPII DNA topoisomerase 2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021433.1 TOPII, ATTOPII DNA topoisomerase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021433.2 TOPII, ATTOPII DNA topoisomerase 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre01.g009250 TOPII, ATTOPII Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.03 OrthoFinder output from all 47 species
Dcu_g04147 TOPII, ATTOPII DNA topoisomerase *(TOP2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032138001 TOPII, ATTOPII Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.02 OrthoFinder output from all 47 species
Gb_11673 TOPII, ATTOPII DNA topoisomerase (TOP2) 0.03 OrthoFinder output from all 47 species
Gb_12824 TOPII, ATTOPII DNA topoisomerase 2 OS=Pisum sativum (sp|o24308|top2_pea : 112.0) 0.03 OrthoFinder output from all 47 species
Len_g32193 TOPII, ATTOPII not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37198 TOPII, ATTOPII DNA topoisomerase *(TOP2) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07573 TOPII, ATTOPII DNA topoisomerase *(TOP2) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08991 No alias DNA topoisomerase *(TOP2) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11875 TOPII, ATTOPII DNA topoisomerase *(TOP2) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015542_P001 TOPII, ATTOPII,... DNA topoisomerase (TOP2) 0.02 OrthoFinder output from all 47 species
Zm00001e023296_P001 TOPII, ATTOPII,... DNA topoisomerase (TOP2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!