Description : transcription factor (mTERF)
Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_10041174g0010 | |
Cluster | HCCA: Cluster_256 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g13791 | No alias | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g49279 | No alias | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g05025 | No alias | mTERF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g60921 | No alias | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.05G060600.1 | Ceric.05G060600 | mTERF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g25274 | No alias | mTERF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01036787001 | No alias | RNA biosynthesis.organelle... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e027097_P001 | Zm00001e027097 | transcription factor (mTERF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003690 | MTERF | 132 | 310 |
No external refs found! |