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  5. Pp3c9_12490V3.1

Pp3c9_12490V3.1 (Pp3c9_12490)


Aliases : Pp3c9_12490

Description : Glycine-rich protein family


Gene families : OG0000463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_12490V3.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00180520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00115700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G46150 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.01 OrthoFinder output from all 47 species
Ala_g23119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G000900.1 Ceric.03G000900 not classified & original description: pacid=50571733... 0.02 OrthoFinder output from all 47 species
Dac_g30261 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19917 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g48973 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g00257 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os02g16610.1 LOC_Os02g16610 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g03234 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g08532 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g53705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g06270.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g01392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27248 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g43422 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002223 No alias not classified & original description: CDS=1-618 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006134 No alias not classified & original description: CDS=1-957 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020255 No alias not classified & original description: CDS=1-648 0.02 OrthoFinder output from all 47 species
Solyc08g008150.1.1 Solyc08g008150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e009249_P001 Zm00001e009249 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e016378_P001 Zm00001e016378 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 68 158
No external refs found!