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  5. Pp3c6_20830V3.1

Pp3c6_20830V3.1 (Pp3c6_20830)


Aliases : Pp3c6_20830

Description : ENTH/VHS family protein


Gene families : OG0001605 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_20830V3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT3G59290 No alias ENTH/VHS family protein 0.02 OrthoFinder output from all 47 species
LOC_Os01g53670.1 LOC_Os01g53670 Clathrin interactor EPSIN 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Len_g15438 No alias clathrin cargo adaptor *(Epsin) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g17974 No alias clathrin cargo adaptor *(Epsin) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g06614 No alias clathrin cargo adaptor *(Epsin) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g11562 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo77462 No alias Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013809 ENTH 59 178
No external refs found!