Pp3c5_3950V3.1 (Pp3c5_3950)

Aliases : Pp3c5_3950

Description : No annotation

Gene families : OG0008980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008980_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c5_3950V3.1
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
Pp3c16_11240V3.1	Pp3c16_11240	No annotation	0.03	OrthoFinder output from all 47 species
Pp3c17_9470V3.1	Pp3c17_9470	No annotation	0.02	OrthoFinder output from all 47 species
Pp3c22_17170V3.1	Pp3c22_17170	No annotation	0.05	OrthoFinder output from all 47 species
Pp3c23_7790V3.1	Pp3c23_7790	No annotation	0.01	OrthoFinder output from all 47 species
Pp3c27_3880V3.1	Pp3c27_3880	No annotation	0.02	OrthoFinder output from all 47 species
Pp3c2_17790V3.1	Pp3c2_17790	No annotation	0.07	OrthoFinder output from all 47 species
Pp3c6_10570V3.1	Pp3c6_10570	No annotation	0.02	OrthoFinder output from all 47 species
Pp3c6_15820V3.1	Pp3c6_15820	No annotation	0.02	OrthoFinder output from all 47 species
Pp3c7_22780V3.1	Pp3c7_22780	No annotation	0.02	OrthoFinder output from all 47 species
Pp3c7_2630V3.1	Pp3c7_2630	No annotation	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006313	transposition, DNA-mediated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0032196	transposition	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002492	Transposase_Tc1-like	34	83
IPR038717	Tc1-like_DDE_dom	81	146

External Links

No external refs found!