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  5. Pp3c4_150V3.1

Pp3c4_150V3.1 (emb2410, Pp3c4_150)


Aliases : emb2410, Pp3c4_150

Description : embryo defective 2410


Gene families : OG0003871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_150V3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G25660 emb2410 embryo defective 2410 0.01 OrthoFinder output from all 47 species
Aob_g32014 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Gb_34395 emb2410 no description available(sp|w0ryd3|ssg4_orysj : 233.0) 0.02 OrthoFinder output from all 47 species
Gb_34396 emb2410 no description available(sp|f4isl7|ti236_arath : 109.0) 0.01 OrthoFinder output from all 47 species
Lfl_g38744 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.01 OrthoFinder output from all 47 species
Nbi_g07920 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009306 protein secretion IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR007452 TamB 1700 1945
No external refs found!