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  5. Pp3c4_14790V3.1

Pp3c4_14790V3.1 (NRPC1, Pp3c4_14790)


Aliases : NRPC1, Pp3c4_14790

Description : nuclear RNA polymerase C1


Gene families : OG0013869 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013869_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_14790V3.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_11520V3.1 NRPC1, Pp3c10_11520 nuclear RNA polymerase A1 0.03 OrthoFinder output from all 47 species
Pp3c3_29710V3.1 NRPC1, Pp3c3_29710 RNA polymerase II large subunit 0.03 OrthoFinder output from all 47 species
Pp3c3_35870V3.1 CRK8, Pp3c3_35870 nuclear RNA polymerase C1 0.02 OrthoFinder output from all 47 species
Pp3c9_12713V3.1 NRPC1, Pp3c9_12713 nuclear RNA polymerase A1 0.02 OrthoFinder output from all 47 species
Pp3c9_17770V3.1 NRPC1, Pp3c9_17770 nuclear RNA polymerase C1 0.03 OrthoFinder output from all 47 species
Pp3c9_17780V3.1 NRPC1, Pp3c9_17780 nuclear RNA polymerase C1 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007081 RNA_pol_Rpb1_5 211 418
No external refs found!