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  5. Pp3c3_29390V3.1

Pp3c3_29390V3.1 (Pp3c3_29390)


Aliases : Pp3c3_29390

Description : Sec23/Sec24 protein transport family protein


Gene families : OG0001171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_29390V3.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder output from all 47 species
Sam_g12240 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Tin_g10965 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 650 738
IPR006895 Znf_Sec23_Sec24 58 96
IPR006900 Sec23/24_helical_dom 538 636
IPR006896 Sec23/24_trunk_dom 130 407
IPR012990 Sec23_24_beta_S 418 521
No external refs found!