Pp3c2_5620V3.1 (Pp3c2_5620)

Aliases : Pp3c2_5620

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c2_5620V3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Adi_g022904	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g035090	HRE2	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g036158	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g041739	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g045253	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g056328	No alias	subgroup ERF-I transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g079523	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g081431	RAP2.6	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g097717	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g111965	ATERF3, ERF3	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g10286	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g10573	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g11527	TINY2	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Als_g14120	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Als_g45354	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.01	OrthoFinder output from all 47 species
Aob_g03996	HRD	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aop_g00507	WIN1, SHN1	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g33217	No alias	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene05675.t2	Aspi01Gene05675	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene07338.t1	Aspi01Gene07338	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene09185.t1	RAP2.2, Aspi01Gene09185	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aspi01Gene17042.t1	Aspi01Gene17042	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene17044.t1	Aspi01Gene17044	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene17045.t1	Aspi01Gene17045	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene21082.t1	Aspi01Gene21082	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene21086.t1	Aspi01Gene21086	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene21527.t1	WIN1, SHN1,...	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene23161.t1	Aspi01Gene23161	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene28304.t1	Aspi01Gene28304	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene29234.t1	Rap2.6L, Aspi01Gene29234	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34481.t1	Aspi01Gene34481	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene37118.t1	Aspi01Gene37118	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52705.t1	DREB26, Aspi01Gene52705	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene53872.t1	DEAR1, CEJ1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66121.t1	Aspi01Gene66121	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g010458	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.01	OrthoFinder output from all 47 species
Azfi_s0205.g057738	No alias	subgroup ERF-I transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0398.g068193	No alias	subgroup ERF-I transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g26938	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.01	OrthoFinder output from all 47 species
Ceric.04G057600.1	RAP2.2, Ceric.04G057600	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Dcu_g13202	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Dcu_g33863	No alias	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
GSVIVT01027770001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
LOC_Os01g07120.1	DREB2A, DREB2,...	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
LOC_Os02g32040.1	LOC_Os02g32040	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
LOC_Os02g55380.1	LOC_Os02g55380	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
LOC_Os08g07700.1	LOC_Os08g07700	Ethylene-responsive transcription factor ERF087...	0.01	OrthoFinder output from all 47 species
Len_g13204	No alias	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Mp4g22290.1	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Mp5g02590.1	No alias	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Ore_g29062	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Pir_g06333	TINY2	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Pir_g35803	TINY2	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Pir_g39807	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g53948	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g63856	DREB26	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g09943	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Pnu_g22604	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Pnu_g27452	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ppi_g02117	HRE1	subgroup ERF-VI transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001285	No alias	not classified & original description: CDS=1-1830	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011575	DEAR1, CEJ1, ATERF#011	not classified & original description: CDS=1-717	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014837	tny	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016650	ERF38, ATERF38	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g04619	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e025999_P001	Zm00001e025999	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	158	206

External Links

No external refs found!

Pp3c2_5620V3.1 (Pp3c2_5620)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation