Aliases : Pp3c2_3220
Description : Clathrin, heavy chain
Gene families : OG0002108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c2_3220V3.1 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G11130 | No alias | Clathrin, heavy chain | 0.02 | OrthoFinder output from all 47 species | |
Aev_g20290 | No alias | heavy chain of clathrin triskelion & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g08144 | No alias | heavy chain of clathrin triskelion & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01024708001 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.01 | OrthoFinder output from all 47 species | |
Gb_33029 | No alias | Clathrin heavy chain 2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Mp6g19660.1 | No alias | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species | |
Smo149750 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g096000.3.1 | Solyc03g096000 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g052510.4.1 | Solyc05g052510 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e009296_P003 | Zm00001e009296 | heavy chain of clathrin triskelion | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e020822_P001 | Zm00001e020822 | heavy chain of clathrin triskelion | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e023940_P002 | Zm00001e023940 | heavy chain of clathrin triskelion | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005198 | structural molecule activity | IEA | Interproscan |
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
BP | GO:0016192 | vesicle-mediated transport | IEA | Interproscan |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEA | Interproscan |
CC | GO:0030132 | clathrin coat of coated pit | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR015348 | Clathrin_H-chain_linker_core | 344 | 365 |
IPR022365 | Clathrin_H-chain_propeller_rpt | 155 | 197 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1288 | 1431 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 850 | 982 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 701 | 840 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1437 | 1579 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 557 | 690 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 1143 | 1281 |
IPR000547 | Clathrin_H-chain/VPS_repeat | 993 | 1131 |
No external refs found! |