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  5. Pp3c2_19430V3.1

Pp3c2_19430V3.1 (CARB, Pp3c2_19430)


Aliases : CARB, Pp3c2_19430

Description : carbamoyl phosphate synthetase B


Gene families : OG0004410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_19430V3.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.3 CARB Nucleotide metabolism.pyrimidines.ribonucleotide... 0.01 OrthoFinder output from all 47 species
Dcu_g07166 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
LOC_Os01g38970.1 CARB, LOC_Os01g38970 large subunit of carbamoyl phosphate synthetase... 0.02 OrthoFinder output from all 47 species
MA_10329277g0010 CARB Carbamoyl-phosphate synthase large chain, chloroplastic... 0.01 OrthoFinder output from all 47 species
Nbi_g09294 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Sam_g10563 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Solyc06g075340.4.1 CARB, Solyc06g075340 large subunit of carbamoyl phosphate synthetase... 0.03 OrthoFinder output from all 47 species
Zm00001e027763_P001 CARB, Zm00001e027763 large subunit of carbamoyl phosphate synthetase... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011607 MGS-like_dom 1113 1199
IPR005480 CarbamoylP_synth_lsu_oligo 569 689
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 828 1031
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 270 477
No external refs found!