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  5. Pp3c2_18590V3.1

Pp3c2_18590V3.1 (ATXYL1, XYL1, TRG1,...)


Aliases : ATXYL1, XYL1, TRG1, Pp3c2_18590

Description : alpha-xylosidase 1


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_18590V3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene49732.t1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g27499 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g08321 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Solyc04g007150.3.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 302 684
IPR031727 Gal_mutarotase_N 55 180
No external refs found!