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  5. Pp3c23_21870V3.1

Pp3c23_21870V3.1 (TOR2, TUA4, Pp3c23_21870)


Aliases : TOR2, TUA4, Pp3c23_21870

Description : tubulin alpha-4 chain


Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_21870V3.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Adi_g088318 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Als_g11639 TOR2, TUA4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g05764 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Aspi01Gene08274.t1 TUA3, Aspi01Gene08274 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
MA_93486g0010 TUA3 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
No external refs found!