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  5. Pp3c23_19500V3.1

Pp3c23_19500V3.1 (FUM1, Pp3c23_19500)


Aliases : FUM1, Pp3c23_19500

Description : FUMARASE 2


Gene families : OG0004044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_19500V3.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00124970 FUM1,... Cellular respiration.tricarboxylic acid cycle.fumarase 0.01 OrthoFinder output from all 47 species
AT2G47510 FUM1 fumarase 1 0.03 OrthoFinder output from all 47 species
Dde_g11795 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os03g21950.1 FUM1, LOC_Os03g21950 fumarase 0.04 OrthoFinder output from all 47 species
MA_1659g0010 FUM1 fumarase 0.01 OrthoFinder output from all 47 species
Pir_g65520 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Smo113300 FUM1 Cellular respiration.tricarboxylic acid cycle.fumarase 0.01 OrthoFinder output from all 47 species
Solyc09g075450.3.1 FUM1, Solyc09g075450 fumarase 0.03 OrthoFinder output from all 47 species
Zm00001e001600_P001 FUM1, Zm00001e001600 fumarase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018951 Fumarase_C_C 445 497
IPR022761 Fumarate_lyase_N 51 379
No external refs found!