1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c23_1330V3.1

Pp3c23_1330V3.1 (Pp3c23_1330)


Aliases : Pp3c23_1330

Description : No annotation


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_1330V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g041289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059665 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.10G071000.1 Ceric.10G071000 not classified & original description: pacid=50611819... 0.02 OrthoFinder output from all 47 species
Lfl_g29604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c10_20080V3.1 Pp3c10_20080 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c10_8280V3.1 Pp3c10_8280 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c12_12280V3.1 Pp3c12_12280 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from all 47 species
Pp3c12_15570V3.1 Pp3c12_15570 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c13_3860V3.1 Pp3c13_3860 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c14_12819V3.1 Pp3c14_12819 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from all 47 species
Pp3c14_990V3.1 Pp3c14_990 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c17_2840V3.1 Pp3c17_2840 No annotation 0.05 OrthoFinder output from all 47 species
Pp3c18_20830V3.1 Pp3c18_20830 DNA/RNA polymerases superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c19_10910V3.1 Pp3c19_10910 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.06 OrthoFinder output from all 47 species
Pp3c1_26670V3.1 Pp3c1_26670 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from all 47 species
Pp3c23_16480V3.1 Pp3c23_16480 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from all 47 species
Pp3c24_5030V3.1 Pp3c24_5030 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.07 OrthoFinder output from all 47 species
Pp3c25_5410V3.1 Pp3c25_5410 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c26_790V3.1 Pp3c26_790 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c2_13360V3.1 Pp3c2_13360 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c2_13470V3.1 Pp3c2_13470 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c2_31360V3.1 Pp3c2_31360 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c2_33830V3.1 Pp3c2_33830 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c3_29090V3.1 Pp3c3_29090 DNA/RNA polymerases superfamily protein 0.04 OrthoFinder output from all 47 species
Pp3c4_15120V3.1 Pp3c4_15120 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c4_5390V3.1 Pp3c4_5390 No annotation 0.06 OrthoFinder output from all 47 species
Pp3c5_22531V3.1 Pp3c5_22531 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c6_1560V3.1 Pp3c6_1560 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c9_1850V3.1 Pp3c9_1850 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!