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  5. Pp3c22_3390V3.1

Pp3c22_3390V3.1 (Pp3c22_3390)


Aliases : Pp3c22_3390

Description : Signal recognition particle, SRP9/SRP14 subunit


Gene families : OG0005482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_3390V3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT2G43640 No alias Signal recognition particle, SRP9/SRP14 subunit 0.01 OrthoFinder output from all 47 species
Aev_g04421 No alias component *(SRP14) of SRP (signal recognition particle)... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.15 No alias Protein translocation.endoplasmic... 0.02 OrthoFinder output from all 47 species
Cre01.g031200 No alias Protein translocation.endoplasmic... 0.01 OrthoFinder output from all 47 species
Dcu_g11577 No alias component *(SRP14) of SRP (signal recognition particle)... 0.01 OrthoFinder output from all 47 species
Ehy_g08776 No alias component *(SRP14) of SRP (signal recognition particle)... 0.02 OrthoFinder output from all 47 species
Mp5g12670.1 No alias component SRP14 of SRP (signal recognition particle) complex 0.03 OrthoFinder output from all 47 species
Sam_g11809 No alias component *(SRP14) of SRP (signal recognition particle)... 0.01 OrthoFinder output from all 47 species
Solyc06g053385.2.1 Solyc06g053385 component SRP14 of SRP (signal recognition particle) complex 0.02 OrthoFinder output from all 47 species
Zm00001e006890_P001 Zm00001e006890 component SRP14 of SRP (signal recognition particle) complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
MF GO:0030942 endoplasmic reticulum signal peptide binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003210 Signal_recog_particle_SRP14 78 171
No external refs found!