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  5. Pp3c22_17807V3.1

Pp3c22_17807V3.1 (GMI1, Pp3c22_17807)


Aliases : GMI1, Pp3c22_17807

Description : gamma-irradiation and mitomycin c induced 1


Gene families : OG0001616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_17807V3.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00227450 GMI1,... Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01038554001 IDN1, DMS3 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Mp7g15910.1 GMI1 no description available(sp|f4kfs5|gmi1_arath : 444.0) 0.02 OrthoFinder output from all 47 species
Solyc03g071810.1.1 Solyc03g071810 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc03g083130.3.1 GMI1, Solyc03g083130 no description available(sp|f4kfs5|gmi1_arath : 874.0) 0.01 OrthoFinder output from all 47 species
Solyc03g083170.3.1 IDN1, DMS3,... component DMS3 of DNA methylation accessory complex (DDR) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!