Heatmap: Cluster_95 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
Pp3c10_18629V3.1 (Pp3c10_18629)
- -1.47 - - - 0.88 0.09 0.62 - 0.59 0.35 0.57 -0.1 - -1.84 - 2.69 - 3.83 1.4 - - - - - 1.75 0.9 - -0.21 0.28 - -0.77 -1.12 -1.97 - - - 1.0 - -1.24 - - - - -1.65 1.39 -1.55 -3.44
Pp3c13_10760V3.1 (Pp3c13_10760)
- - - -0.4 0.65 2.83 0.04 1.55 - -0.15 - - - - -4.54 - -0.07 -1.02 3.51 - - - - 2.08 1.75 -0.85 0.64 -0.9 -0.39 -2.57 -1.65 -0.34 -2.1 0.46 - - - -0.07 -0.5 -0.66 -0.12 -1.01 -1.18 -0.46 - - 0.71 -1.52
Pp3c14_15340V3.1 (Pp3c14_15340)
- 1.5 -0.21 - -1.49 -0.65 - - - -0.85 - - 0.08 - -1.27 - -0.76 0.04 4.31 -0.03 - 0.08 0.92 - -2.07 -1.01 -1.97 - - -0.42 -0.47 -1.49 -0.46 - - - - 1.41 -0.87 -0.65 0.87 1.01 - -0.75 - 1.49 -1.5 -0.1
Pp3c14_21500V3.1 (Pp3c14_21500)
- -2.67 -4.67 -5.82 - - - - - -3.16 - - -5.39 - -6.46 - 2.68 0.99 4.62 1.45 - -7.15 -0.26 -7.55 2.73 -3.63 -2.03 - -6.9 -2.1 -4.46 - -6.33 -4.24 - - -7.4 -0.33 -5.41 -1.14 -5.0 -2.94 -2.9 -0.11 -5.14 -0.51 -1.11 -8.59
Pp3c14_4491V3.1 (Pp3c14_4491)
- - -1.86 -0.58 -2.07 -3.29 -2.05 -1.97 -2.66 -0.38 -7.42 -6.75 -2.89 -7.27 0.31 -5.11 1.9 -0.08 4.67 2.05 -1.22 -0.11 1.81 0.9 0.25 -1.95 -0.27 -7.19 - -6.08 -5.68 -7.44 -6.5 -6.0 - -4.43 -5.92 -2.8 -4.97 -5.51 - - -7.42 - -5.07 -2.4 - -4.86
Pp3c15_11790V3.1 (Pp3c15_11790)
- - -1.5 0.33 0.35 0.76 -0.37 0.63 - - - - - - - - 0.22 -0.54 3.63 2.41 2.88 2.73 - 1.51 1.94 -0.91 - - -2.67 - - - -4.49 - - - - -2.62 - - - - - - - - - -
Pp3c15_380V3.1 (Pp3c15_380)
- - - - - - - - - - - - - - - - -0.68 -2.11 5.03 3.52 0.99 -0.19 - - -1.86 - - - - - - - - - - - - - - - - - - - - - - -
- -1.83 1.03 -2.1 -2.29 0.01 1.7 0.12 - -3.72 - -2.58 -2.35 - -3.56 -0.03 2.47 -2.5 4.24 3.0 0.09 -1.92 - - -1.17 -0.77 -1.77 -2.71 - -5.65 - - -2.42 - - - - -2.15 -2.58 - -2.19 -1.31 -2.02 - -1.32 0.04 - -3.12
Pp3c16_12290V3.1 (Pp3c16_12290)
-1.11 - -2.88 - 1.42 -1.53 - - - -2.04 - - - -1.7 -4.04 - 0.97 -1.45 4.36 2.27 3.02 1.73 - -2.16 -1.67 - -1.32 - - -5.4 -2.76 -0.73 -4.15 - - - - -2.29 - -1.38 - -0.96 0.26 - - -1.81 -2.09 -
Pp3c17_16860V3.1 (Pp3c17_16860)
- - 1.16 -0.49 -0.32 2.83 2.15 3.28 0.44 - - - - - - - 0.3 - 4.04 1.08 0.71 - - - - - - - - -5.42 -2.73 - - - - - - - - - - - - - - - - -
Pp3c17_5849V3.1 (Pp3c17_5849)
- - 0.17 - 1.02 0.74 0.02 0.13 - - - - - - - - 0.77 - 4.69 2.98 1.72 - - - -0.62 0.78 - - - - - - - - - - - - - - - - - - - - - -
Pp3c17_9800V3.1 (Pp3c17_9800)
2.59 -0.27 2.16 -2.04 0.12 1.78 2.06 2.14 0.46 - - - - - -1.29 -0.59 0.31 -0.48 3.43 - - - 0.9 0.96 0.07 - - - - - -2.7 - - - - - - - - - - - 0.22 0.4 - -2.25 -2.03 -2.92
Pp3c18_11180V3.1 (Pp3c18_11180)
- - - - - - - - - - - - - - - - 1.53 - 4.94 2.94 - - - - - 1.53 - - - -0.04 - - - - - - - 1.52 - - - - - - - - - -
Pp3c18_18750V3.1 (Pp3c18_18750)
- - -4.09 - -6.05 -2.27 -3.78 -4.72 -1.02 - - - -4.61 - -6.27 - 1.98 - 5.13 2.0 -1.88 - 1.72 - -4.46 -1.43 - - -3.67 -5.38 - - - - -4.3 - - - - - - - - - - - - -5.69
- - -1.36 - -2.33 -2.6 -1.14 - - - - - - -3.22 -5.67 - 0.09 -3.35 4.9 1.97 0.05 0.54 0.57 1.62 1.01 0.63 - - -3.41 -3.65 - - - - - - - -1.51 - -2.48 - - -2.86 - - -3.38 -2.87 -
Pp3c20_11919V3.1 (Pp3c20_11919)
- - 0.07 - - - - - - - -1.41 - -2.86 -0.61 -2.32 - 0.8 2.12 3.45 0.91 2.18 0.65 1.93 - 2.1 1.04 2.18 - 0.19 -3.07 -2.69 - - 0.46 -0.98 - -1.5 -2.0 - - - - -2.12 -1.92 -0.19 -0.96 - -3.26
Pp3c20_2300V3.1 (Pp3c20_2300)
- - -2.01 - 0.74 - -1.17 - - 0.14 - - 0.28 - -2.23 -0.7 1.91 1.54 3.96 1.0 1.5 1.88 - -1.3 1.88 1.03 1.43 - -1.47 -1.92 - - - - - - - - - -0.52 - - - -1.7 - - -0.07 -1.4
Pp3c20_4640V3.1 (Pp3c20_4640)
- - - - 0.52 - - - - - - -0.09 - -0.18 -2.45 - 0.29 - 5.16 - - - - -0.64 - 0.25 -1.04 - - -1.3 -0.07 - -2.63 -0.99 - - - - - -0.86 - -0.41 - - - -0.28 -0.28 -2.39
Pp3c21_20310V3.1 (Pp3c21_20310)
-4.09 -2.27 -5.28 -4.88 -2.21 -1.67 -2.11 -0.99 -2.64 -2.85 -5.82 -5.57 -3.93 -5.61 -4.92 -4.02 3.24 -2.06 4.48 2.48 -1.75 0.53 1.93 -2.82 -1.24 -3.27 -1.77 - -7.69 -2.67 -5.85 -5.77 -5.4 - -8.64 -5.7 -6.06 -0.85 -7.79 -4.28 - - -5.61 -5.42 -7.36 -0.5 -5.39 -3.85
Pp3c21_20330V3.1 (Pp3c21_20330)
- -2.17 -27.65 -1.72 -2.18 -0.14 -2.43 - 0.5 -3.8 - - - - -3.32 -2.53 3.48 -1.89 4.05 2.85 -0.73 1.6 1.44 -2.77 -0.87 -2.99 -1.25 -5.03 -5.99 -2.86 - -5.87 -6.45 - - -4.58 - -1.77 - -2.52 - -4.31 - -4.64 - -0.7 -3.84 -3.53
Pp3c21_20520V3.1 (Pp3c21_20520)
- -3.26 -1.33 -4.42 0.37 -0.58 - -1.57 - -4.98 - - - -5.12 -7.04 1.15 2.17 -1.79 4.57 1.54 0.5 2.98 -0.5 - -0.92 -2.64 -5.09 - - -5.46 - - -7.13 -4.92 - - -3.63 -2.27 - -4.36 - - - -3.81 - -2.13 - -
- - -0.97 - 0.26 1.17 2.77 1.12 -1.74 - - - - - -3.92 - 2.4 1.03 4.19 1.94 -0.59 0.5 - -1.51 0.65 -0.45 - - - -4.53 - - - - - - - - -2.54 - - -2.86 - - - -3.24 - -3.87
Pp3c22_17870V3.1 (Pp3c22_17870)
- - 0.2 -2.38 -4.02 -2.73 -3.6 - - - - - - - - - 2.59 -4.05 4.93 2.75 0.39 -0.17 -0.81 - -1.8 - -5.96 - - -7.13 - - - - - - - - - - - - - - - - - -5.42
Pp3c22_19190V3.1 (Pp3c22_19190)
2.72 - - - -0.77 - - - - - - - - - - - 1.02 - 4.89 3.18 - - - - - - - - - -3.09 - - - - - - - - - - - - - - - - - -
Pp3c24_12970V3.1 (Pp3c24_12970)
- - - 2.81 0.0 0.85 - 0.46 - - - - - - - - 0.1 - 4.97 - - - - - - 1.41 - - - - - - - - - 0.08 - - - - - - - - - - - -0.53
Pp3c25_11001V3.1 (Pp3c25_11001)
- - 0.45 1.96 0.85 0.57 0.63 -1.31 2.02 - - - - -1.5 -5.32 1.62 -0.12 - 4.18 1.78 0.79 1.76 -1.64 - - 0.64 -2.05 - - -5.95 -2.2 - - - - - - - - - - - - - - - - -
Pp3c25_11020V3.1 (Pp3c25_11020)
- 0.04 -0.1 -0.13 -1.25 - -1.34 - - - - - - - - 0.74 0.64 - 4.97 1.49 0.2 1.78 -0.94 -3.3 - 0.72 - - - - - - - - - - - - - - - - - - - - - -
Pp3c25_11060V3.1 (Pp3c25_11060)
- 0.04 -0.1 -0.13 -1.25 - -1.34 - - - - - - - - 0.74 0.64 - 4.97 1.49 0.2 1.78 -0.94 -3.3 - 0.72 - - - - - - - - - - - - - - - - - - - - - -
Pp3c25_7150V3.1 (Pp3c25_7150)
- - -3.87 -4.35 1.04 -0.71 -0.17 -2.11 -5.17 -0.83 -4.97 -4.31 0.12 -1.56 -2.02 0.75 -0.3 -2.95 3.49 2.6 0.74 1.45 -5.53 -3.25 -1.34 0.7 -2.12 0.01 -3.51 -1.38 0.61 -7.09 -1.99 -6.72 - 0.18 -3.69 0.94 -6.4 -1.01 -1.5 0.88 1.34 -0.83 -6.97 0.98 -0.18 -5.89
Pp3c25_8510V3.1 (Pp3c25_8510)
- - - - - - - - - - - - - - - - - - 5.49 - - - - - - - - - - - - - - - - - - - - - 1.67 - - - - - - -
- - 1.18 1.1 0.25 1.12 2.36 2.46 2.31 0.08 - - - -0.54 -4.74 - 0.5 -1.34 3.82 - - - - - 0.52 0.9 - -0.34 -0.59 -1.52 -2.24 -1.78 - - - -1.56 - -1.76 - - - - -1.26 - - -1.78 - -
Pp3c27_5834V3.1 (Pp3c27_5834)
1.84 -0.0 1.95 -1.0 -0.41 1.77 1.62 2.08 0.36 -1.2 -4.47 -6.65 -2.65 -3.23 -1.53 0.17 1.67 1.05 2.82 -0.02 -0.78 -0.97 0.41 -0.23 0.93 -0.67 -0.63 -1.1 -1.49 -2.46 -2.56 -3.02 -2.88 -2.82 -0.93 -2.16 -1.79 -1.6 -4.05 -2.59 -4.4 -3.71 -3.03 -2.1 -3.59 -1.4 -3.14 -3.11
Pp3c27_7540V3.1 (Pp3c27_7540)
- - 1.93 0.25 - 1.38 - 2.86 0.77 - - - - - - 1.12 2.03 - 4.14 0.97 0.74 - 1.95 - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c2_26160V3.1 (Pp3c2_26160)
- - -0.18 1.49 1.33 - - -0.29 - -1.82 - 0.19 0.03 - -2.99 - - - 4.61 - 2.56 0.68 - - 1.22 1.05 -0.93 - - -4.48 - - - - - - - - - - - 0.6 - - - - - -
Pp3c2_34800V3.1 (Pp3c2_34800)
- 1.08 1.77 -1.54 -0.11 1.5 0.18 1.91 0.6 -3.26 - - - -0.66 -2.82 - 1.54 1.99 3.67 1.5 -0.76 0.03 -0.56 - -0.81 -2.09 -2.38 -1.87 -2.15 -1.39 -1.15 -1.13 -1.8 - - - -2.06 -0.81 - -0.63 - -0.84 -1.68 - - -0.85 - -1.31
Pp3c4_11390V3.1 (Pp3c4_11390)
- - - - - 1.85 - - - 1.86 1.03 - - - - - - -0.01 4.37 - - - - 0.1 3.29 - 0.7 - - -2.18 - - - - - - - -0.02 - - - - 0.48 - -0.26 - 0.18 -
Pp3c4_20610V3.1 (Pp3c4_20610)
- 0.35 - - 0.63 2.14 2.67 2.86 - - - - - - - - - -0.2 4.2 -0.17 - - - 0.91 1.45 - - - - - - - -1.31 - - - - -0.43 - - - -0.1 - - - - - -1.75
Pp3c4_25720V3.1 (Pp3c4_25720)
- 2.15 - - - - - - - - - - - - - - - 0.15 4.42 2.74 2.05 - 1.44 - 1.66 -0.27 - - - -3.76 - - - - - - - -0.59 - - - 1.22 - - - - - -1.05
Pp3c6_10270V3.1 (CYP707A2)
- -0.73 0.45 - -3.56 2.45 1.75 0.8 - -1.72 - - -2.91 -2.31 -1.75 -0.96 1.52 -0.59 3.87 2.66 2.01 1.7 -1.05 -2.47 -0.62 -1.27 - - -1.42 -4.12 - - - - - - - - - - - - - - - - - -
Pp3c6_22200V3.1 (Pp3c6_22200)
- -0.95 -1.13 2.65 -0.78 -0.25 0.69 - - -0.08 - - -1.44 - -0.4 - -0.83 1.64 4.47 -1.57 - 1.22 - - -0.02 0.97 - -1.85 -1.54 -1.23 -1.61 -2.3 -1.68 - - - -1.86 -1.03 - -1.62 - - - - -1.56 -2.15 -1.93 -1.38
Pp3c6_30070V3.1 (Pp3c6_30070)
- 0.49 2.07 -0.0 1.43 - -2.12 - -1.54 - - - -2.95 -3.13 -3.72 1.91 2.23 -1.22 4.2 2.22 -0.1 -0.98 - -3.3 -1.31 1.28 -0.21 -3.15 - -7.36 -4.43 -3.59 -5.29 - - -2.85 - - -2.75 - - - - - - - - -4.04
Pp3c6_3900V3.1 (Pp3c6_3900)
- 2.08 0.55 - 0.39 2.43 2.42 2.03 - -2.74 - - - - -3.25 - 1.06 - 3.46 0.51 - -1.78 1.95 -1.33 -0.91 -1.82 2.05 - - -3.93 - - - - - - - - - - - -1.56 -1.41 -2.19 -1.34 - -1.71 -2.44
Pp3c6_980V3.1 (Pp3c6_980)
- - 1.89 - - 1.19 - 2.27 - 0.27 - - -0.33 -1.04 -0.89 - - - 4.2 - 0.62 - - - - - 0.56 -1.0 -0.32 -0.67 0.74 -1.52 0.74 - -5.36 -0.19 -2.48 -0.39 - -0.31 0.48 - - -1.64 1.2 - -1.43 -3.12
Pp3c7_26260V3.1 (Pp3c7_26260)
-3.34 -1.19 0.76 -2.85 -1.82 -0.38 0.34 -0.46 - -2.47 -4.08 -2.0 -2.77 -4.53 -1.83 0.07 0.61 -3.12 4.52 2.98 0.81 -0.32 -0.81 -5.92 -1.14 -0.25 -0.33 -2.34 -2.1 -2.7 -4.59 -6.01 - - -5.25 -6.05 -4.24 -1.97 - -2.46 -1.49 -0.95 -2.99 -4.71 -5.07 -1.52 -4.13 -1.87
Pp3c7_6900V3.1 (Pp3c7_6900)
- - -0.73 -1.78 -0.54 1.48 -1.2 - -1.08 -1.19 - - -0.32 -0.17 -4.53 - - - 4.48 2.12 1.1 -1.32 -0.42 - - -1.36 - 0.59 1.47 -3.09 -0.5 - -1.99 -0.59 -1.63 -1.46 - - - 0.06 - - -0.22 -0.73 - 0.12 - -
Pp3c7_6919V3.1 (Pp3c7_6919)
- - 0.43 - -0.95 - 0.77 - - - - - - 0.51 -5.64 - -0.27 0.03 4.34 0.39 - 0.56 2.44 2.37 - -0.51 - -1.29 -0.62 -1.95 0.04 -1.59 -1.47 - - -1.36 - -1.57 -0.62 - - - -1.07 -0.85 -1.81 -0.01 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.