1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c20_9200V3.1

Pp3c20_9200V3.1 (RPL15, Pp3c20_9200)


Aliases : RPL15, Pp3c20_9200

Description : ribosomal protein L15


Gene families : OG0007453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007453_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_9200V3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00156p00076210 RPL15,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT3G25920 RPL15 ribosomal protein L15 0.1 OrthoFinder output from all 47 species
Adi_g039878 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g13831 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g01589 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aop_g27570 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Azfi_s0007.g010672 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g09914 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.25G066500.1 RPL15, Ceric.25G066500 component *(uL15c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.40 RPL15 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Cre14.g612450 RPL15 Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Dac_g10212 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g43892 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dde_g06279 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g09628 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01011891001 RPL15 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os03g12020.1 RPL15, LOC_Os03g12020 component psRPL15 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Len_g08716 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g24787 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_648g0010 RPL15 component psRPL15 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Mp1g23700.1 RPL15 component psRPL15 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Msp_g04395 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Nbi_g39773 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pir_g15215 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ppi_g00735 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001664 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g09170 No alias component *(uL15c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g09171 No alias component *(uL15c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Smo177574 RPL15 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc05g009370.4.1 RPL15, Solyc05g009370 component psRPL15 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Spa_g06473 RPL15 component *(uL15c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Zm00001e000867_P001 RPL15, Zm00001e000867 component psRPL15 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 97 223
No external refs found!