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  5. Pp3c1_29090V3.1

Pp3c1_29090V3.1 (Pp3c1_29090)


Aliases : Pp3c1_29090

Description : Aconitase/3-isopropylmalate dehydratase protein


Gene families : OG0004189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_29090V3.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0015.g013714 No alias small subunit of methylthioalkylmalate isomerase &... 0.01 OrthoFinder output from all 47 species
Pnu_g07010 No alias small subunit of methylthioalkylmalate isomerase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014282 No alias small subunit of methylthioalkylmalate isomerase &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 159 206
No external refs found!