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  5. Pp3c19_6250V3.1

Pp3c19_6250V3.1 (CHS, TT4, ATCHS, Pp3c19_6250)


Aliases : CHS, TT4, ATCHS, Pp3c19_6250

Description : Chalcone and stilbene synthase family protein


Gene families : OG0000113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_6250V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Als_g31249 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g43702 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g06581 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27246 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37129 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11603 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49730 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21468 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22138 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06700 No alias Enzyme classification.EC_2 transferases.EC_2.3... 0.01 OrthoFinder output from all 47 species
LOC_Os10g34360.1 LAP6, LOC_Os10g34360 hydroxyalkyl alpha-pyrone synthase 0.01 OrthoFinder output from all 47 species
Ore_g04342 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12913 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g31874 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40161 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g02562 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e017402_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Zm00001e017410_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001099 Chalcone/stilbene_synt_N 34 251
IPR012328 Chalcone/stilbene_synt_C 261 409
No external refs found!