Pp3c17_3450V3.1 (Pp3c17_3450)

Aliases : Pp3c17_3450

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c17_3450V3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT5G50080	ERF110	ethylene response factor 110	0.01	OrthoFinder output from all 47 species
Als_g10580	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g36562	ATERF8, ATERF-8, ERF8	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Als_g37615	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g51788	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g10500	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene03290.t1	Aspi01Gene03290	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene11852.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene24401.t1	DEAR2, Aspi01Gene24401	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30897.t1	ERF-1, ATERF-1,...	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene34123.t1	Aspi01Gene34123	cutin and suberin biosynthesis transcription factor...	0.01	OrthoFinder output from all 47 species
Aspi01Gene41926.t1	RAP2.11, Aspi01Gene41926	transcription factor *(ERN1) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene70906.t1	Aspi01Gene70906	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0001.g000091	ATERF-9, ERF9, ATERF9	not classified & original description: CDS=1-585	0.03	OrthoFinder output from all 47 species
Azfi_s0011.g012465	RAP2.1	not classified & original description: CDS=1-1059	0.03	OrthoFinder output from all 47 species
Azfi_s0016.g014331	ATERF13, ERF13, EREBP	not classified & original description: CDS=134-1000	0.01	OrthoFinder output from all 47 species
Azfi_s0149.g053251	No alias	subgroup ERF-V transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dac_g08898	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g46449	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g18823	RAP2.11	transcription factor *(ERN1) & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g23766	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27094	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ehy_g27343	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
GSVIVT01028315001	ERF1, ATERF1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.08	OrthoFinder output from all 47 species
GSVIVT01032983001	Rap2.6L	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
GSVIVT01035098001	ERF72, EBP, ATEBP, RAP2.3	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
LOC_Os01g66270.1	LOC_Os01g66270	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
LOC_Os08g35240.1	LOC_Os08g35240	Ethylene-responsive transcription factor ERF017...	0.03	OrthoFinder output from all 47 species
Len_g36919	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g46730	ATERF-9, ERF9, ATERF9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g34326	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_912855g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.08	OrthoFinder output from all 47 species
Mp5g01050.1	No alias	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Mp5g12480.1	HRE2	Ethylene-responsive transcription factor ERF073...	0.01	OrthoFinder output from all 47 species
Msp_g04571	DEAR2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g05560	No alias	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g18009	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g03524	ORA47	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g25455	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29062	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g29063	ATERF11, ERF11	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g36192	ERF72, EBP, ATEBP, RAP2.3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43816	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44015	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pp3c4_23930V3.1	ERF-1, ATERF-1,...	ethylene responsive element binding factor 1	0.02	OrthoFinder output from all 47 species
Ppi_g32689	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016160	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc01g090370.3.1	ATERF13, ERF13,...	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Solyc03g026270.3.1	DREB1A, ATCBF3,...	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	OrthoFinder output from all 47 species
Solyc03g026280.3.1	DREB1A, ATCBF3,...	transcription factor (DREB). transcription factor (CBF/DREB1)	0.02	OrthoFinder output from all 47 species
Solyc09g066350.1.1	Solyc09g066350	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
Solyc12g009240.1.1	Solyc12g009240	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	44	98

External Links

No external refs found!

Pp3c17_3450V3.1 (Pp3c17_3450)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation