Pp3c17_20640V3.1 (PAE2, Pp3c17_20640)


Aliases : PAE2, Pp3c17_20640

Description : 20S proteasome alpha subunit E2


Gene families : OG0003892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003892_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_20640V3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT3G14290 PAE2 20S proteasome alpha subunit E2 0.01 OrthoFinder output from all 47 species
Aev_g07660 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.64 ATPAE1, PAE1 Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre17.g724350 ATPAE1, PAE1 Protein degradation.26S proteasome.20S core... 0.01 OrthoFinder output from all 47 species
Dde_g00304 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
LOC_Os11g40140.1 ATPAE1, PAE1,... component alpha type-5 of 26S proteasome 0.01 OrthoFinder output from all 47 species
Mp4g02150.1 PAE2 component alpha type-5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp8g11890.1 PAE2 component alpha type-5 of 26S proteasome 0.01 OrthoFinder output from all 47 species
Nbi_g13477 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g09993 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Smo267349 PAE2 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Solyc02g070510.3.1 PAE2, Solyc02g070510 component alpha type-5 of 26S proteasome 0.01 OrthoFinder output from all 47 species
Spa_g52177 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Tin_g00368 ATPAE1, PAE1 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Zm00001e038983_P001 ATPAE1, PAE1,... component alpha type-5 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 8 30
IPR001353 Proteasome_sua/b 31 217
No external refs found!