Pp3c17_1120V3.1 (AMY1, ATAMY1, Pp3c17_1120)


Aliases : AMY1, ATAMY1, Pp3c17_1120

Description : alpha-amylase-like


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_1120V3.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0104.g044887 AMY1, ATAMY1 alpha amylase & original description: CDS=1-729 0.02 OrthoFinder output from all 47 species
Dde_g43320 AMY2, ATAMY2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g00923 AMY2, ATAMY2 alpha amylase & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 128 288
IPR012850 A-amylase_bs_C 444 504
No external refs found!