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Aliases : Pp3c16_19780
Description : Plant self-incompatibility protein S1 family
Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c16_19780V3.1 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G17080 | No alias | Plant self-incompatibility protein S1 family | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01014872001 | No alias | S-protein homolog 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Len_g46817 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g15540.1 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc03g025660.1.1 | Solyc03g025660 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g053460.1.1 | Solyc05g053460 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g011100.1.1 | Solyc09g011100 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g091300.1.1 | Solyc09g091300 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g091310.1.1 | Solyc09g091310 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g091320.1.1 | Solyc09g091320 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g091330.1.1 | Solyc09g091330 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g091340.1.1 | Solyc09g091340 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g091350.1.1 | Solyc09g091350 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g092370.1.1 | Solyc09g092370 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g086610.1.1 | Solyc10g086610 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010264 | Self-incomp_S1 | 59 | 157 |
| No external refs found! |