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  5. Pp3c16_19430V3.1

Pp3c16_19430V3.1 (Pp3c16_19430)


Aliases : Pp3c16_19430

Description : Pectin lyase-like superfamily protein


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_19430V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g046688 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127146 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25187 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g17432 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0016.g014409 No alias pectin methylesterase & original description: CDS=201-1415 0.01 OrthoFinder output from all 47 species
Ceric.11G006600.1 Ceric.11G006600 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Gb_08496 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_10267810g0010 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Ore_g32792 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31349 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e007306_P001 Zm00001e007306 pectin methylesterase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 100 364
No external refs found!