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  5. Pp3c16_17710V3.1

Pp3c16_17710V3.1 (Pp3c16_17710)


Aliases : Pp3c16_17710

Description : Ribosomal L22e protein family


Gene families : OG0000996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000996_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_17710V3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G05560 No alias Ribosomal L22e protein family 0.02 OrthoFinder output from all 47 species
AT5G27770 No alias Ribosomal L22e protein family 0.02 OrthoFinder output from all 47 species
Adi_g012188 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aob_g00408 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72593.t1 Aspi01Gene72593 component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.08G045600.1 Ceric.08G045600 component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Dcu_g18517 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 47 species
LOC_Os03g22340.1 LOC_Os03g22340 component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 47 species
LOC_Os07g47710.1 LOC_Os07g47710 component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Lfl_g31513 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Msp_g03306 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Solyc01g099830.3.1 Solyc01g099830 component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Zm00001e010958_P001 Zm00001e010958 component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 18 56
No external refs found!