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  5. Pp3c15_9360V3.1

Pp3c15_9360V3.1 (Pp3c15_9360)


Aliases : Pp3c15_9360

Description : RWP-RK domain-containing protein


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_9360V3.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00091350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NIN-like... 0.01 OrthoFinder output from all 47 species
Adi_g058551 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Adi_g101592 No alias RKD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g20202 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Als_g27476 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007535 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G081500.1 Ceric.23G081500 RKD-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.33G040700.1 Ceric.33G040700 RKD-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.93 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000449.15 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001304.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001443.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021135.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g23653 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Dde_g16879 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Gb_36930 No alias transcription factor (RKD) 0.01 OrthoFinder output from all 47 species
LOC_Os12g12970.1 LOC_Os12g12970 transcription factor (RKD) 0.01 OrthoFinder output from all 47 species
MA_10430030g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024068 No alias germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Sam_g14926 No alias germ cell differentiation factor *(RKD) & original... 0.01 OrthoFinder output from all 47 species
Smo73105 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.01 OrthoFinder output from all 47 species
Zm00001e017870_P001 Zm00001e017870 transcription factor (RKD) 0.01 OrthoFinder output from all 47 species
Zm00001e036104_P001 Zm00001e036104 transcription factor (RKD) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 407 454
No external refs found!